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We are (co-)developing several large open source bioinformatics software packages for molecular modeling, systems biology, and computational proteomics.


QVADIS Java3D program package
Further information about the research part...

 

Brownmove, a many-particle Brownian-Dynamics simulation package

 

Vesimulus, molecular stochastic simulations of metabolic or signaling systems

 

TopoView (download here)


EPOSBP (Ensembles of Pockets on Protein Surfaces)

 

CESIP (cellular simulation package) in C++

 

PROPORES (PROtein PORE identification toolS)

 

SnvDMiR (Associating the genomic  proximity of genetic variants with deregulated miRNAs and differentially methylated regions) ... download the source code in R


 


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